Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 AC006128.1-201ENST00000624704 1661 ntBASIC20.48■□□□□ 0.87
BRD9Q9H8M2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 AC010947.1-201ENST00000623454 693 ntBASIC20.47■□□□□ 0.87
BRD9Q9H8M2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRD9Q9H8M2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRD9Q9H8M2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
BRD9Q9H8M2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 TERF1P1-201ENST00000311003 1181 ntBASIC20.45■□□□□ 0.86
BRD9Q9H8M2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 AL031985.4-201ENST00000642138 673 ntBASIC20.45■□□□□ 0.86
BRD9Q9H8M2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BRD9Q9H8M2 KRT8P17-201ENST00000453110 1448 ntBASIC20.44■□□□□ 0.86
BRD9Q9H8M2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 SLC25A3P1-201ENST00000443844 931 ntBASIC20.44■□□□□ 0.86
BRD9Q9H8M2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRD9Q9H8M2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms