Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LHX5Q9H2C1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 AC124283.5-201ENST00000624661 1809 ntBASIC20.91■□□□□ 0.94
LHX5Q9H2C1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LHX5Q9H2C1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.9■□□□□ 0.94
LHX5Q9H2C1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
LHX5Q9H2C1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.89■□□□□ 0.93
LHX5Q9H2C1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 AC008403.3-201ENST00000598924 454 ntBASIC20.89■□□□□ 0.93
LHX5Q9H2C1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LHX5Q9H2C1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 AL121829.2-201ENST00000620908 328 ntBASIC20.88■□□□□ 0.93
LHX5Q9H2C1 AL121906.2-201ENST00000621597 723 ntBASIC20.88■□□□□ 0.93
LHX5Q9H2C1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LHX5Q9H2C1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms