Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MIR718-201ENST00000390190 70 ntBASIC21.5■■□□□ 1.03
CDT1Q9H211 RPS2P55-201ENST00000397318 883 ntBASIC21.5■■□□□ 1.03
CDT1Q9H211 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.5■■□□□ 1.03
CDT1Q9H211 AC012618.2-201ENST00000428058 849 ntBASIC21.5■■□□□ 1.03
CDT1Q9H211 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.5■■□□□ 1.03
CDT1Q9H211 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 AC107956.1-201ENST00000494359 873 ntBASIC21.5■■□□□ 1.03
CDT1Q9H211 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.5■■□□□ 1.03
CDT1Q9H211 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.5■■□□□ 1.03
CDT1Q9H211 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.5■■□□□ 1.03
CDT1Q9H211 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDT1Q9H211 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDT1Q9H211 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.5■■□□□ 1.03
CDT1Q9H211 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDT1Q9H211 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.49■■□□□ 1.03
CDT1Q9H211 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.49■■□□□ 1.03
CDT1Q9H211 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDT1Q9H211 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.49■■□□□ 1.03
CDT1Q9H211 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.49■■□□□ 1.03
CDT1Q9H211 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.49■■□□□ 1.03
CDT1Q9H211 AC233702.5-201ENST00000584107 538 ntBASIC21.49■■□□□ 1.03
CDT1Q9H211 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDT1Q9H211 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.49■■□□□ 1.03
CDT1Q9H211 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDT1Q9H211 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.49■■□□□ 1.03
CDT1Q9H211 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDT1Q9H211 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.48■■□□□ 1.03
CDT1Q9H211 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CDT1Q9H211 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDT1Q9H211 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CDT1Q9H211 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.48■■□□□ 1.03
CDT1Q9H211 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CDT1Q9H211 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.48■■□□□ 1.03
CDT1Q9H211 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.48■■□□□ 1.03
CDT1Q9H211 AC004264.1-201ENST00000608354 794 ntBASIC21.48■■□□□ 1.03
CDT1Q9H211 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 HTR7P1-201ENST00000538670 1336 ntBASIC21.48■■□□□ 1.03
CDT1Q9H211 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDT1Q9H211 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.48■■□□□ 1.03
CDT1Q9H211 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.47■■□□□ 1.03
CDT1Q9H211 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.47■■□□□ 1.03
CDT1Q9H211 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.47■■□□□ 1.03
CDT1Q9H211 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDT1Q9H211 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.47■■□□□ 1.03
CDT1Q9H211 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.47■■□□□ 1.03
CDT1Q9H211 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDT1Q9H211 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.47■■□□□ 1.03
CDT1Q9H211 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.47■■□□□ 1.03
CDT1Q9H211 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.46■■□□□ 1.03
CDT1Q9H211 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDT1Q9H211 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.46■■□□□ 1.03
CDT1Q9H211 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.46■■□□□ 1.03
CDT1Q9H211 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.46■■□□□ 1.03
CDT1Q9H211 YBX1P10-201ENST00000444752 975 ntBASIC21.46■■□□□ 1.03
CDT1Q9H211 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.46■■□□□ 1.03
CDT1Q9H211 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.46■■□□□ 1.03
CDT1Q9H211 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.46■■□□□ 1.03
CDT1Q9H211 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDT1Q9H211 AL135905.2-201ENST00000584934 1404 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms