Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COMMD4Q9H0A8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 CYP21A1P-202ENST00000354927 1481 ntBASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 Z82202.1-201ENST00000623446 1880 ntBASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 UBE2DNL-204ENST00000602536 740 ntBASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 AL591742.1-201ENST00000604433 565 ntBASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD4Q9H0A8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 ZNRF2P3-201ENST00000424200 374 ntBASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 MYCNOS-205ENST00000641950 531 ntBASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.43■□□□□ 0.38
COMMD4Q9H0A8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COMMD4Q9H0A8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms