Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
FOXB1Q99853 RPS2P52-201ENST00000469610 820 ntBASIC17.44■□□□□ 0.38
FOXB1Q99853 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXB1Q99853 CD99P1-205ENST00000527459 561 ntBASIC17.44■□□□□ 0.38
FOXB1Q99853 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXB1Q99853 AC120498.8-201ENST00000614275 531 ntBASIC17.44■□□□□ 0.38
FOXB1Q99853 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXB1Q99853 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXB1Q99853 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXB1Q99853 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 AP001271.2-201ENST00000624018 1556 ntBASIC17.44■□□□□ 0.38
FOXB1Q99853 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXB1Q99853 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXB1Q99853 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.43■□□□□ 0.38
FOXB1Q99853 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXB1Q99853 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXB1Q99853 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXB1Q99853 AP003097.1-201ENST00000530657 1135 ntBASIC17.43■□□□□ 0.38
FOXB1Q99853 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
FOXB1Q99853 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXB1Q99853 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXB1Q99853 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXB1Q99853 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 TMEM179-206ENST00000616017 1645 ntBASIC17.43■□□□□ 0.38
FOXB1Q99853 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXB1Q99853 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 AC124283.5-201ENST00000624661 1809 ntBASIC17.42■□□□□ 0.38
FOXB1Q99853 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
FOXB1Q99853 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXB1Q99853 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.42■□□□□ 0.38
FOXB1Q99853 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.42■□□□□ 0.38
FOXB1Q99853 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.42■□□□□ 0.38
FOXB1Q99853 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXB1Q99853 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.42■□□□□ 0.38
FOXB1Q99853 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FOXB1Q99853 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FOXB1Q99853 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FOXB1Q99853 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXB1Q99853 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXB1Q99853 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXB1Q99853 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FOXB1Q99853 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 AC116351.2-201ENST00000606540 1585 ntBASIC17.41■□□□□ 0.38
FOXB1Q99853 AC009237.14-201ENST00000609975 1594 ntBASIC17.41■□□□□ 0.38
FOXB1Q99853 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXB1Q99853 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXB1Q99853 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FOXB1Q99853 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXB1Q99853 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FOXB1Q99853 AC026366.1-201ENST00000488803 879 ntBASIC17.41■□□□□ 0.38
FOXB1Q99853 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXB1Q99853 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.41■□□□□ 0.38
FOXB1Q99853 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.41■□□□□ 0.38
FOXB1Q99853 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXB1Q99853 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXB1Q99853 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
FOXB1Q99853 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
FOXB1Q99853 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXB1Q99853 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXB1Q99853 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms