Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AP006288.1-201ENST00000446065 395 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TOB2P1-201ENST00000469761 992 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TK1-205ENST00000590862 642 ntTSL 3 BASIC6.1□□□□□ -1.43
HMCN1Q96RW7 AC010327.4-202ENST00000591484 748 ntBASIC6.1□□□□□ -1.43
HMCN1Q96RW7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AF228730.6-201ENST00000641497 218 ntBASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AC084121.3-201ENST00000641716 218 ntBASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AC105233.6-201ENST00000642093 218 ntBASIC6.09□□□□□ -1.43
HMCN1Q96RW7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 ELK2BP-201ENST00000415014 1224 ntBASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 METTL21AP1-201ENST00000438852 635 ntBASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HMCN1Q96RW7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMCN1Q96RW7 AL162741.1-201ENST00000565563 1558 ntBASIC6.09□□□□□ -1.44
HMCN1Q96RW7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC6.09□□□□□ -1.44
HMCN1Q96RW7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMCN1Q96RW7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMCN1Q96RW7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HMCN1Q96RW7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms