Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSMD1Q96PZ7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 KSR1P1-201ENST00000446298 240 ntBASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 FAM99A-202ENST00000538190 1989 ntBASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSMD1Q96PZ7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 AC007375.3-201ENST00000600936 2314 ntBASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 HMGA1P5-201ENST00000412453 271 ntBASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 AL137060.1-201ENST00000618151 2648 ntBASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.92■□□□□ 0.3
CSMD1Q96PZ7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 AF106564.1-201ENST00000607058 2553 ntBASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 HMGN1P19-201ENST00000436976 333 ntBASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 CKBP1-201ENST00000565489 1086 ntBASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CSMD1Q96PZ7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 AC092183.1-201ENST00000469884 875 ntBASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 AC083849.1-201ENST00000615227 514 ntBASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CSMD1Q96PZ7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms