Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 LIN28AP1-201ENST00000429574 405 ntBASIC21.1■□□□□ 0.97
ZNF558Q96NG5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 AC097488.1-201ENST00000507834 756 ntBASIC21.1■□□□□ 0.97
ZNF558Q96NG5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 EGLN1P1-201ENST00000531623 762 ntBASIC21.1■□□□□ 0.97
ZNF558Q96NG5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF558Q96NG5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.09■□□□□ 0.97
ZNF558Q96NG5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 CRYGFP-201ENST00000418459 633 ntBASIC21.09■□□□□ 0.97
ZNF558Q96NG5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 DUX4L26-201ENST00000489078 1255 ntBASIC21.09■□□□□ 0.97
ZNF558Q96NG5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF558Q96NG5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 PHGDH-210ENST00000641115 1638 ntBASIC21.08■□□□□ 0.97
ZNF558Q96NG5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 TSPY14P-201ENST00000303979 915 ntBASIC21.08■□□□□ 0.97
ZNF558Q96NG5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 ATP5G1P1-201ENST00000448724 379 ntBASIC21.08■□□□□ 0.97
ZNF558Q96NG5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ZNF558Q96NG5 AC010203.1-204ENST00000548782 407 ntBASIC21.08■□□□□ 0.97
ZNF558Q96NG5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
ZNF558Q96NG5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
ZNF558Q96NG5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF558Q96NG5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.08■□□□□ 0.96
ZNF558Q96NG5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 AC104076.2-201ENST00000448912 469 ntBASIC21.07■□□□□ 0.96
ZNF558Q96NG5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF558Q96NG5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 AC079834.2-201ENST00000609776 1949 ntBASIC21.06■□□□□ 0.96
ZNF558Q96NG5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF558Q96NG5 ECEL1P2-202ENST00000465689 757 ntBASIC21.06■□□□□ 0.96
ZNF558Q96NG5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms