Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP54Q96N23 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.51■□□□□ 0.71
CFAP54Q96N23 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CFAP54Q96N23 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.51■□□□□ 0.71
CFAP54Q96N23 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 SLC25A6P4-201ENST00000586535 553 ntBASIC19.5■□□□□ 0.71
CFAP54Q96N23 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CFAP54Q96N23 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.5■□□□□ 0.71
CFAP54Q96N23 AL445675.2-201ENST00000620291 557 ntBASIC19.5■□□□□ 0.71
CFAP54Q96N23 HYMAI.1-201ENST00000620949 238 ntBASIC19.5■□□□□ 0.71
CFAP54Q96N23 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 CCR12P-201ENST00000446203 998 ntBASIC19.49■□□□□ 0.71
CFAP54Q96N23 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CFAP54Q96N23 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CFAP54Q96N23 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.48■□□□□ 0.71
CFAP54Q96N23 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP54Q96N23 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CFAP54Q96N23 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 AC106795.1-205ENST00000512851 1056 ntBASIC19.47■□□□□ 0.71
CFAP54Q96N23 AC120114.3-201ENST00000611923 658 ntBASIC19.47■□□□□ 0.71
CFAP54Q96N23 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms