Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 TFP1-202ENST00000475455 1573 ntBASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM5Q96HC4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 AL109923.1-201ENST00000618799 583 ntBASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM5Q96HC4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 AL138781.1-201ENST00000566567 1274 ntBASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 AC142086.2-201ENST00000569753 217 ntBASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 AC133041.1-202ENST00000642053 222 ntBASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM5Q96HC4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM5Q96HC4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.33■□□□□ 0.69
PDLIM5Q96HC4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDLIM5Q96HC4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PDLIM5Q96HC4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 AC060766.5-201ENST00000590539 871 ntBASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms