Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCD1Q96GM5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 LINC01521-201ENST00000504184 1943 ntBASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 AP001271.2-201ENST00000624018 1556 ntBASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCD1Q96GM5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 AL691432.2-201ENST00000607222 2038 ntBASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCD1Q96GM5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 MIR718-201ENST00000390190 70 ntBASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCD1Q96GM5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 YBX1P10-201ENST00000444752 975 ntBASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 RARRES2P10-201ENST00000564312 460 ntBASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SMARCD1Q96GM5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.83■□□□□ 0.92
SMARCD1Q96GM5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms