Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC47A1Q96FL8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC47A1Q96FL8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 AC009237.14-201ENST00000609975 1594 ntBASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 AC087623.3-201ENST00000607047 1098 ntBASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC47A1Q96FL8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC47A1Q96FL8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC47A1Q96FL8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC47A1Q96FL8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC47A1Q96FL8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC47A1Q96FL8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms