Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM11Q96F44 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM11Q96F44 AC007952.6-201ENST00000573168 2673 ntBASIC20.94■□□□□ 0.94
TRIM11Q96F44 AC003957.1-201ENST00000625108 2673 ntBASIC20.94■□□□□ 0.94
TRIM11Q96F44 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 AC006970.2-201ENST00000450065 779 ntBASIC20.94■□□□□ 0.94
TRIM11Q96F44 AL121832.2-201ENST00000610979 668 ntBASIC20.94■□□□□ 0.94
TRIM11Q96F44 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM11Q96F44 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM11Q96F44 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRIM11Q96F44 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM11Q96F44 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM11Q96F44 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM11Q96F44 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM11Q96F44 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM11Q96F44 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
TRIM11Q96F44 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM11Q96F44 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRIM11Q96F44 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 AL390719.1-204ENST00000412397 1219 ntBASIC20.91■□□□□ 0.94
TRIM11Q96F44 AC073210.2-201ENST00000430369 194 ntBASIC20.91■□□□□ 0.94
TRIM11Q96F44 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM11Q96F44 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM11Q96F44 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRIM11Q96F44 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRIM11Q96F44 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM11Q96F44 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 MIPEPP3-201ENST00000412105 444 ntBASIC20.9■□□□□ 0.94
TRIM11Q96F44 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms