Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AL121894.2-201ENST00000602977 491 ntBASIC24.36■■□□□ 1.49
CNKSR1Q969H4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CNKSR1Q969H4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.35■■□□□ 1.49
CNKSR1Q969H4 AC018553.1-201ENST00000616682 1458 ntBASIC24.35■■□□□ 1.49
CNKSR1Q969H4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 AL121603.2-201ENST00000557373 2117 ntBASIC24.35■■□□□ 1.49
CNKSR1Q969H4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR1Q969H4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 KRT18P48-201ENST00000434763 852 ntBASIC24.34■■□□□ 1.49
CNKSR1Q969H4 AC007663.1-201ENST00000438948 1240 ntBASIC24.34■■□□□ 1.49
CNKSR1Q969H4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 AL121956.5-201ENST00000625261 221 ntBASIC24.34■■□□□ 1.49
CNKSR1Q969H4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 KRT16P6-202ENST00000425692 1426 ntBASIC24.34■■□□□ 1.49
CNKSR1Q969H4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CNKSR1Q969H4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 TPM4P1-201ENST00000436100 807 ntBASIC24.33■■□□□ 1.49
CNKSR1Q969H4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 AC141257.4-201ENST00000634557 245 ntBASIC24.33■■□□□ 1.49
CNKSR1Q969H4 AC136944.6-201ENST00000634818 245 ntBASIC24.33■■□□□ 1.49
CNKSR1Q969H4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CNKSR1Q969H4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CNKSR1Q969H4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CNKSR1Q969H4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.33■■□□□ 1.48
CNKSR1Q969H4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CNKSR1Q969H4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
CNKSR1Q969H4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 HLA-A-209ENST00000638375 975 ntBASIC24.32■■□□□ 1.48
CNKSR1Q969H4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CNKSR1Q969H4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 PCED1CP-201ENST00000419887 785 ntBASIC24.31■■□□□ 1.48
CNKSR1Q969H4 FAM86EP-206ENST00000510506 987 ntBASIC24.31■■□□□ 1.48
CNKSR1Q969H4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 AC011558.1-201ENST00000623459 338 ntBASIC24.31■■□□□ 1.48
CNKSR1Q969H4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CNKSR1Q969H4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CNKSR1Q969H4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CNKSR1Q969H4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
CNKSR1Q969H4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms