Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
HPS1Q92902 HLA-L-209ENST00000420110 1011 ntBASIC18■□□□□ 0.47
HPS1Q92902 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18■□□□□ 0.47
HPS1Q92902 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18■□□□□ 0.47
HPS1Q92902 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18■□□□□ 0.47
HPS1Q92902 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS1Q92902 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18■□□□□ 0.47
HPS1Q92902 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS1Q92902 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HPS1Q92902 AC055733.4-201ENST00000638462 1354 ntBASIC18■□□□□ 0.47
HPS1Q92902 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
HPS1Q92902 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HPS1Q92902 HCG11-201ENST00000411553 5696 ntBASIC18■□□□□ 0.47
HPS1Q92902 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS1Q92902 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS1Q92902 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS1Q92902 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS1Q92902 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS1Q92902 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HPS1Q92902 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS1Q92902 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS1Q92902 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
HPS1Q92902 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 KRT87P-202ENST00000534226 1464 ntBASIC17.98■□□□□ 0.47
HPS1Q92902 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
HPS1Q92902 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
HPS1Q92902 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 AC018470.1-201ENST00000624790 3129 ntBASIC17.98■□□□□ 0.47
HPS1Q92902 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS1Q92902 AC026471.6-201ENST00000622954 1905 ntBASIC17.98■□□□□ 0.47
HPS1Q92902 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS1Q92902 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 AP000997.3-201ENST00000623333 2250 ntBASIC17.97■□□□□ 0.47
HPS1Q92902 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS1Q92902 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS1Q92902 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS1Q92902 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
HPS1Q92902 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS1Q92902 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS1Q92902 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS1Q92902 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HPS1Q92902 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms