Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 SPCS2P1-201ENST00000561636 679 ntBASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 AC009065.1-201ENST00000564055 1225 ntBASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 AC096733.2-201ENST00000609937 1394 ntBASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 AC245052.3-201ENST00000450182 901 ntBASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 COPE-202ENST00000349893 948 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 RPS2P1-201ENST00000434010 821 ntBASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 AL773604.1-201ENST00000617417 272 ntBASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SYNE2Q8WXH0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC027601.4-201ENST00000611259 610 ntBASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AF186996.4-201ENST00000467186 377 ntBASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms