Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM58Q8NG06 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM58Q8NG06 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM58Q8NG06 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM58Q8NG06 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TRIM58Q8NG06 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM58Q8NG06 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM58Q8NG06 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
TRIM58Q8NG06 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM58Q8NG06 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.02■□□□□ 0.95
TRIM58Q8NG06 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 AL031963.3-201ENST00000606441 850 ntBASIC21.01■□□□□ 0.95
TRIM58Q8NG06 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM58Q8NG06 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRIM58Q8NG06 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
TRIM58Q8NG06 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21■□□□□ 0.95
TRIM58Q8NG06 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 AL591742.1-201ENST00000604433 565 ntBASIC21■□□□□ 0.95
TRIM58Q8NG06 RALB-208ENST00000631312 311 ntTSL 5 BASIC21■□□□□ 0.95
TRIM58Q8NG06 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21■□□□□ 0.95
TRIM58Q8NG06 KRT8P20-201ENST00000423953 1409 ntBASIC21■□□□□ 0.95
TRIM58Q8NG06 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21■□□□□ 0.95
TRIM58Q8NG06 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21■□□□□ 0.95
TRIM58Q8NG06 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRIM58Q8NG06 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM58Q8NG06 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 YBX1P1-201ENST00000445822 960 ntBASIC20.99■□□□□ 0.95
TRIM58Q8NG06 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM58Q8NG06 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
TRIM58Q8NG06 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 UBE2DNL-204ENST00000602536 740 ntBASIC20.98■□□□□ 0.95
TRIM58Q8NG06 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM58Q8NG06 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM58Q8NG06 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms