Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRFBP1Q8NEF9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRFBP1Q8NEF9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SRFBP1Q8NEF9 AC009237.14-201ENST00000609975 1594 ntBASIC18.89■□□□□ 0.62
SRFBP1Q8NEF9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRFBP1Q8NEF9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
SRFBP1Q8NEF9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SRFBP1Q8NEF9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 AC006557.6-201ENST00000623071 864 ntBASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 AC112907.3-201ENST00000577781 2400 ntBASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRFBP1Q8NEF9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SRFBP1Q8NEF9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRFBP1Q8NEF9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms