Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 AP005242.2-201ENST00000580065 1175 ntBASIC31.16■■■□□ 2.58
CFAP43Q8NDM7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CFAP43Q8NDM7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFAP43Q8NDM7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC31.15■■■□□ 2.58
CFAP43Q8NDM7 LIN28AP1-201ENST00000429574 405 ntBASIC31.15■■■□□ 2.58
CFAP43Q8NDM7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CFAP43Q8NDM7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC31.15■■■□□ 2.58
CFAP43Q8NDM7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 FAM8A6P-201ENST00000407496 1135 ntBASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 TPM4P1-201ENST00000436100 807 ntBASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 LINC01238-205ENST00000567549 1107 ntBASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CFAP43Q8NDM7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 MESTP1-201ENST00000404287 994 ntBASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 KRT18P56-201ENST00000507275 550 ntBASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 KRT18P48-201ENST00000434763 852 ntBASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 ECEL1P2-202ENST00000465689 757 ntBASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 CR392000.1-201ENST00000624770 1228 ntBASIC31.13■■■□□ 2.57
CFAP43Q8NDM7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CFAP43Q8NDM7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC31.12■■■□□ 2.57
CFAP43Q8NDM7 AC009947.2-201ENST00000444014 672 ntBASIC31.12■■■□□ 2.57
CFAP43Q8NDM7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC31.12■■■□□ 2.57
CFAP43Q8NDM7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CFAP43Q8NDM7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 TSPY14P-201ENST00000303979 915 ntBASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 C1QL1P1-201ENST00000568105 661 ntBASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC31.11■■■□□ 2.57
CFAP43Q8NDM7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFAP43Q8NDM7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 KRT126P-201ENST00000549467 1181 ntBASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 AL031133.1-201ENST00000406807 723 ntBASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFAP43Q8NDM7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 AC092720.2-201ENST00000602388 1665 ntBASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 AC117947.1-201ENST00000427448 529 ntBASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 ATP5G1P1-201ENST00000448724 379 ntBASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFAP43Q8NDM7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms