Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.11■□□□□ 0.81
PGBD3Q8N328 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.11■□□□□ 0.81
PGBD3Q8N328 AC012306.2-201ENST00000609350 630 ntBASIC20.11■□□□□ 0.81
PGBD3Q8N328 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PGBD3Q8N328 AL049796.1-201ENST00000565336 1766 ntBASIC20.11■□□□□ 0.81
PGBD3Q8N328 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.11■□□□□ 0.81
PGBD3Q8N328 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.1■□□□□ 0.81
PGBD3Q8N328 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PGBD3Q8N328 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 UNC93B2-201ENST00000285383 730 ntBASIC20.09■□□□□ 0.81
PGBD3Q8N328 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD3Q8N328 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 KRT8P20-201ENST00000423953 1409 ntBASIC20.09■□□□□ 0.81
PGBD3Q8N328 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
PGBD3Q8N328 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD3Q8N328 NUDT16P1-203ENST00000513809 620 ntBASIC20.08■□□□□ 0.81
PGBD3Q8N328 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
PGBD3Q8N328 MIR6786-201ENST00000616843 113 ntBASIC20.08■□□□□ 0.81
PGBD3Q8N328 CR392000.1-201ENST00000624770 1228 ntBASIC20.08■□□□□ 0.81
PGBD3Q8N328 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.08■□□□□ 0.8
PGBD3Q8N328 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.08■□□□□ 0.8
PGBD3Q8N328 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD3Q8N328 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD3Q8N328 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PGBD3Q8N328 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.8
PGBD3Q8N328 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 RBM17P1-201ENST00000453646 1190 ntBASIC20.07■□□□□ 0.8
PGBD3Q8N328 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 RN7SL850P-201ENST00000579959 291 ntBASIC20.07■□□□□ 0.8
PGBD3Q8N328 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD3Q8N328 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PGBD3Q8N328 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD3Q8N328 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD3Q8N328 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD3Q8N328 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD3Q8N328 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD3Q8N328 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD3Q8N328 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms