Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB43Q86YS6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAB43Q86YS6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 KRASP1-201ENST00000407852 552 ntBASIC18.87■□□□□ 0.61
RAB43Q86YS6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 AC027702.1-201ENST00000563810 1770 ntBASIC18.87■□□□□ 0.61
RAB43Q86YS6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 AP001412.1-201ENST00000608405 714 ntBASIC18.87■□□□□ 0.61
RAB43Q86YS6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB43Q86YS6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB43Q86YS6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 AL135905.2-201ENST00000584934 1404 ntBASIC18.86■□□□□ 0.61
RAB43Q86YS6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 SNORA78-201ENST00000459373 127 ntBASIC18.86■□□□□ 0.61
RAB43Q86YS6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 AC023632.3-201ENST00000521633 145 ntBASIC18.86■□□□□ 0.61
RAB43Q86YS6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.86■□□□□ 0.61
RAB43Q86YS6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB43Q86YS6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB43Q86YS6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 Z98882.1-201ENST00000622160 2253 ntBASIC18.85■□□□□ 0.61
RAB43Q86YS6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 KRT8P36-201ENST00000489121 1440 ntBASIC18.85■□□□□ 0.61
RAB43Q86YS6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 MIR2861-201ENST00000636310 90 ntBASIC18.85■□□□□ 0.61
RAB43Q86YS6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB43Q86YS6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB43Q86YS6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB43Q86YS6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB43Q86YS6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB43Q86YS6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB43Q86YS6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB43Q86YS6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB43Q86YS6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RAB43Q86YS6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms