Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRTM1Q86UE6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 AC123595.1-201ENST00000440769 1046 ntBASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRTM1Q86UE6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 AP001271.2-201ENST00000624018 1556 ntBASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 NEFHP1-201ENST00000412845 2629 ntBASIC17.16■□□□□ 0.34
LRRTM1Q86UE6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 KRT16P6-202ENST00000425692 1426 ntBASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 AC026471.1-201ENST00000564629 3026 ntBASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM1Q86UE6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRRTM1Q86UE6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
LRRTM1Q86UE6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.14■□□□□ 0.34
LRRTM1Q86UE6 AL138781.2-201ENST00000617896 1843 ntBASIC17.14■□□□□ 0.34
LRRTM1Q86UE6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRRTM1Q86UE6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms