Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CROCCP2Q86T23 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 UNC93B3-201ENST00000308076 687 ntBASIC20.1■□□□□ 0.81
CROCCP2Q86T23 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 AC099791.1-201ENST00000416440 715 ntBASIC20.1■□□□□ 0.81
CROCCP2Q86T23 AC091799.1-201ENST00000422823 811 ntBASIC20.1■□□□□ 0.81
CROCCP2Q86T23 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP2Q86T23 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 BCL2-203ENST00000589955 5011 ntBASIC20.09■□□□□ 0.81
CROCCP2Q86T23 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 CROCCP3-202ENST00000420820 1947 ntBASIC20.09■□□□□ 0.81
CROCCP2Q86T23 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 KRT16P6-202ENST00000425692 1426 ntBASIC20.09■□□□□ 0.81
CROCCP2Q86T23 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP2Q86T23 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 AC097381.1-201ENST00000429019 1296 ntBASIC20.08■□□□□ 0.81
CROCCP2Q86T23 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.08■□□□□ 0.81
CROCCP2Q86T23 AC105265.2-201ENST00000467189 838 ntBASIC20.08■□□□□ 0.81
CROCCP2Q86T23 AC024257.2-201ENST00000549699 147 ntBASIC20.08■□□□□ 0.81
CROCCP2Q86T23 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CROCCP2Q86T23 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CROCCP2Q86T23 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP2Q86T23 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP2Q86T23 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP2Q86T23 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.06■□□□□ 0.8
CROCCP2Q86T23 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP2Q86T23 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP2Q86T23 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms