Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 AP000523.1-201ENST00000398242 1049 ntBASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 AC083906.6-201ENST00000641366 219 ntBASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 AC079781.4-201ENST00000641908 219 ntBASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.49■■□□□ 1.19
COL13A1Q5TAT6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 AC010327.4-202ENST00000591484 748 ntBASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL13A1Q5TAT6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.47■■□□□ 1.19
COL13A1Q5TAT6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 AC104819.1-201ENST00000504587 486 ntBASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 AL773604.1-201ENST00000617417 272 ntBASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.46■■□□□ 1.19
COL13A1Q5TAT6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
COL13A1Q5TAT6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 RPSAP43-201ENST00000402237 625 ntBASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 LINC00265-3P-201ENST00000447588 903 ntBASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
COL13A1Q5TAT6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL13A1Q5TAT6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms