Protein–RNA interactions for Protein: Q5T700

LDLRAD1, Low-density lipoprotein receptor class A domain-containing protein 1, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1Q5T700 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 IER3-202ENST00000376377 1350 ntBASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 Z98882.1-201ENST00000622160 2253 ntBASIC23.07■■□□□ 1.28
LDLRAD1Q5T700 AC233723.2-201ENST00000623798 2106 ntBASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 AC026396.1-201ENST00000419388 421 ntBASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LDLRAD1Q5T700 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 HOMER2P1-201ENST00000455653 964 ntBASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 AL031432.5-201ENST00000641059 760 ntBASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
LDLRAD1Q5T700 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 AL450487.1-201ENST00000426799 995 ntBASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 AC005229.4-201ENST00000610085 2198 ntBASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LDLRAD1Q5T700 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 TSPY17P-201ENST00000450329 467 ntBASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AC116407.4-201ENST00000623319 1061 ntBASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LDLRAD1Q5T700 AL024507.2-201ENST00000606070 2574 ntBASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LDLRAD1Q5T700 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms