Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.263e-6■■□□□ 13.7
SRSF1Q07955 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.15□□□□□ -0.33e-6■■□□□ 13.7
SRSF1Q07955 SLC4A2-218ENST00000494125 782 ntTSL 223.01■■□□□ 1.273e-10■■□□□ 13.7
SRSF1Q07955 SLC4A2-216ENST00000490898 702 ntTSL 316.32■□□□□ 0.23e-10■■□□□ 13.7
SRSF1Q07955 SLC4A2-205ENST00000463414 793 ntTSL 316.22■□□□□ 0.193e-10■■□□□ 13.7
SRSF1Q07955 SLC4A2-215ENST00000488420 610 ntTSL 315.3■□□□□ 0.043e-10■■□□□ 13.7
SRSF1Q07955 SLC4A2-213ENST00000483786 571 ntTSL 415.03■□□□□ -03e-10■■□□□ 13.7
SRSF1Q07955 SLC4A2-212ENST00000482950 500 ntTSL 414.94□□□□□ -0.023e-10■■□□□ 13.7
SRSF1Q07955 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.18□□□□□ -0.147e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.02□□□□□ -0.177e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-209ENST00000482225 644 ntTSL 213.54□□□□□ -0.247e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.04□□□□□ -0.327e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.527e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.697e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.47□□□□□ -0.737e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC8.97□□□□□ -0.977e-7■■□□□ 13.7
SRSF1Q07955 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.177e-7■■□□□ 13.7
SRSF1Q07955 STK25-209ENST00000424537 781 ntTSL 224.05■■□□□ 1.445e-8■■□□□ 13.7
SRSF1Q07955 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.175e-8■■□□□ 13.7
SRSF1Q07955 STK25-217ENST00000442307 923 ntTSL 219.84■□□□□ 0.775e-8■■□□□ 13.7
SRSF1Q07955 STK25-229ENST00000492127 1153 ntTSL 219.55■□□□□ 0.725e-8■■□□□ 13.7
SRSF1Q07955 STK25-213ENST00000436402 600 ntTSL 519.15■□□□□ 0.665e-8■■□□□ 13.7
SRSF1Q07955 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.68■□□□□ 0.425e-8■■□□□ 13.7
SRSF1Q07955 STK25-218ENST00000450497 882 ntTSL 517.53■□□□□ 0.45e-8■■□□□ 13.7
SRSF1Q07955 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.38■□□□□ 0.375e-8■■□□□ 13.7
SRSF1Q07955 STK25-211ENST00000429279 580 ntTSL 417.28■□□□□ 0.365e-8■■□□□ 13.7
SRSF1Q07955 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.58■□□□□ 0.255e-8■■□□□ 13.7
SRSF1Q07955 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.135e-8■■□□□ 13.7
SRSF1Q07955 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.145e-8■■□□□ 13.7
SRSF1Q07955 STK25-216ENST00000440109 935 ntTSL 313.5□□□□□ -0.255e-8■■□□□ 13.7
SRSF1Q07955 STK25-233ENST00000496159 463 ntTSL 212.26□□□□□ -0.455e-8■■□□□ 13.7
SRSF1Q07955 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.88□□□□□ -0.515e-8■■□□□ 13.7
SRSF1Q07955 STK25-220ENST00000461760 644 ntTSL 311.14□□□□□ -0.635e-8■■□□□ 13.7
SRSF1Q07955 STK25-206ENST00000413760 801 ntTSL 39.98□□□□□ -0.815e-8■■□□□ 13.7
SRSF1Q07955 STK25-212ENST00000435225 570 ntTSL 47.43□□□□□ -1.225e-8■■□□□ 13.7
SRSF1Q07955 RBMX-202ENST00000419968 940 ntTSL 58.94□□□□□ -0.982e-7■■□□□ 13.7
SRSF1Q07955 RBMX-212ENST00000568578 4887 ntTSL 1 (best)7.59□□□□□ -1.192e-7■■□□□ 13.7
SRSF1Q07955 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.37□□□□□ -1.712e-7■■□□□ 13.7
SRSF1Q07955 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.989e-7■■□□□ 13.7
SRSF1Q07955 CDK5RAP3-234ENST00000584525 530 ntTSL 413.07□□□□□ -0.328e-7■■□□□ 13.7
SRSF1Q07955 CDK5RAP3-235ENST00000584592 372 ntTSL 511.2□□□□□ -0.628e-7■■□□□ 13.7
SRSF1Q07955 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.883e-6■■□□□ 13.7
SRSF1Q07955 FUS-209ENST00000566605 1787 ntTSL 1 (best)20.54■□□□□ 0.887e-8■■□□□ 13.7
SRSF1Q07955 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.867e-8■■□□□ 13.7
SRSF1Q07955 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.87e-8■■□□□ 13.7
SRSF1Q07955 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.337e-8■■□□□ 13.7
SRSF1Q07955 FUS-206ENST00000487509 4920 ntTSL 211.49□□□□□ -0.577e-8■■□□□ 13.7
SRSF1Q07955 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.321e-11■■□□□ 13.7
SRSF1Q07955 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.872e-7■■□□□ 13.6
SRSF1Q07955 VEGFA-221ENST00000520265 336 ntTSL 513.15□□□□□ -0.31e-7■■□□□ 13.6
SRSF1Q07955 FANCA-223ENST00000567284 479 ntTSL 38.17□□□□□ -1.11e-7■■□□□ 13.6
SRSF1Q07955 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.118e-13■■□□□ 13.6
SRSF1Q07955 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.348e-13■■□□□ 13.6
SRSF1Q07955 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.358e-13■■□□□ 13.6
SRSF1Q07955 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.788e-13■■□□□ 13.6
SRSF1Q07955 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.828e-7■■□□□ 13.6
SRSF1Q07955 MICALL2-212ENST00000487187 764 ntTSL 516.94■□□□□ 0.31e-9■■□□□ 13.6
SRSF1Q07955 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.53■□□□□ 0.566e-10■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-206ENST00000578018 567 ntTSL 216.1■□□□□ 0.175e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-226ENST00000583182 709 ntTSL 314.89□□□□□ -0.035e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-228ENST00000583363 558 ntTSL 414.89□□□□□ -0.035e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-215ENST00000579780 611 ntTSL 314.39□□□□□ -0.115e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-216ENST00000579853 714 ntTSL 412.51□□□□□ -0.415e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-203ENST00000577442 617 ntTSL 411.52□□□□□ -0.575e-7■■□□□ 13.6
SRSF1Q07955 AC018521.1-201ENST00000582262 575 ntTSL 49.31□□□□□ -0.925e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-224ENST00000582275 442 ntTSL 59.28□□□□□ -0.925e-7■■□□□ 13.6
SRSF1Q07955 CDK5RAP3-220ENST00000581160 490 ntTSL 37.98□□□□□ -1.135e-7■■□□□ 13.6
SRSF1Q07955 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.1■□□□□ 0.493e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-223ENST00000515011 2175 ntTSL 1 (best)17.84■□□□□ 0.453e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.31□□□□□ -0.123e-8■■□□□ 13.6
SRSF1Q07955 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.373e-8■■□□□ 13.6
SRSF1Q07955 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.393e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.84□□□□□ -0.513e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-206ENST00000405053 512 ntTSL 59.46□□□□□ -0.93e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-212ENST00000505453 1430 ntTSL 58.52□□□□□ -1.053e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-201ENST00000309641 2025 ntTSL 1 (best)8.22□□□□□ -1.093e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.04□□□□□ -1.123e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC7.58□□□□□ -1.23e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC6.75□□□□□ -1.333e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.533e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.32□□□□□ -1.563e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.27□□□□□ -1.573e-8■■□□□ 13.6
SRSF1Q07955 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.32□□□□□ -1.723e-8■■□□□ 13.6
SRSF1Q07955 ENOSF1-217ENST00000584259 6340 ntTSL 28.3□□□□□ -1.082e-6■■□□□ 13.6
SRSF1Q07955 ZDHHC8-204ENST00000436518 557 ntTSL 414.03□□□□□ -0.164e-7■■□□□ 13.6
SRSF1Q07955 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.174e-7■■□□□ 13.6
SRSF1Q07955 ZDHHC8-205ENST00000468112 524 ntTSL 313.88□□□□□ -0.194e-7■■□□□ 13.6
SRSF1Q07955 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.85□□□□□ -0.514e-7■■□□□ 13.6
SRSF1Q07955 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.53□□□□□ -0.564e-7■■□□□ 13.6
SRSF1Q07955 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)12.78□□□□□ -0.362e-7■■□□□ 13.6
SRSF1Q07955 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.182e-13■■□□□ 13.6
SRSF1Q07955 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.212e-13■■□□□ 13.6
SRSF1Q07955 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.262e-13■■□□□ 13.6
SRSF1Q07955 GAK-209ENST00000507580 468 ntTSL 420.1■□□□□ 0.814e-6■■□□□ 13.6
SRSF1Q07955 GAK-207ENST00000505819 1326 ntTSL 518.83■□□□□ 0.614e-6■■□□□ 13.6
SRSF1Q07955 GAK-202ENST00000502656 554 ntTSL 418.1■□□□□ 0.494e-6■■□□□ 13.6
SRSF1Q07955 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.01■□□□□ 0.314e-6■■□□□ 13.6
SRSF1Q07955 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.524e-6■■□□□ 13.6
SRSF1Q07955 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.63□□□□□ -0.554e-6■■□□□ 13.6
SRSF1Q07955 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.576e-12■■□□□ 13.6
Retrieved 100 of 14,836 protein–RNA pairs in 181.4 ms