Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MIPEPP3-201ENST00000412105 444 ntBASIC19.46■□□□□ 0.71
CDKL1Q00532 NCF1B-203ENST00000435988 1254 ntBASIC19.46■□□□□ 0.71
CDKL1Q00532 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL1Q00532 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDKL1Q00532 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKL1Q00532 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL1Q00532 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CDKL1Q00532 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL1Q00532 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL1Q00532 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDKL1Q00532 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL1Q00532 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDKL1Q00532 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDKL1Q00532 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDKL1Q00532 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
CDKL1Q00532 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDKL1Q00532 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.45■□□□□ 0.7
CDKL1Q00532 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.45■□□□□ 0.7
CDKL1Q00532 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.45■□□□□ 0.7
CDKL1Q00532 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL1Q00532 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL1Q00532 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDKL1Q00532 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKL1Q00532 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKL1Q00532 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.44■□□□□ 0.7
CDKL1Q00532 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKL1Q00532 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.44■□□□□ 0.7
CDKL1Q00532 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDKL1Q00532 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.44■□□□□ 0.7
CDKL1Q00532 AC092118.2-201ENST00000613495 667 ntBASIC19.44■□□□□ 0.7
CDKL1Q00532 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDKL1Q00532 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKL1Q00532 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL1Q00532 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKL1Q00532 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.44■□□□□ 0.7
CDKL1Q00532 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKL1Q00532 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKL1Q00532 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKL1Q00532 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 GUSBP6-202ENST00000438529 1198 ntBASIC19.43■□□□□ 0.7
CDKL1Q00532 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKL1Q00532 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 AC009237.14-201ENST00000609975 1594 ntBASIC19.43■□□□□ 0.7
CDKL1Q00532 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL1Q00532 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL1Q00532 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL1Q00532 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDKL1Q00532 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDKL1Q00532 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 TSPY6P-201ENST00000448518 926 ntBASIC19.42■□□□□ 0.7
CDKL1Q00532 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.42■□□□□ 0.7
CDKL1Q00532 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.42■□□□□ 0.7
CDKL1Q00532 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDKL1Q00532 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms