Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.52■□□□□ 0.88
IRX4P78413 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
IRX4P78413 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
IRX4P78413 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
IRX4P78413 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
IRX4P78413 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
IRX4P78413 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.51■□□□□ 0.87
IRX4P78413 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.51■□□□□ 0.87
IRX4P78413 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.51■□□□□ 0.87
IRX4P78413 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.51■□□□□ 0.87
IRX4P78413 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.51■□□□□ 0.87
IRX4P78413 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.51■□□□□ 0.87
IRX4P78413 KRT18P21-201ENST00000515767 1272 ntBASIC20.51■□□□□ 0.87
IRX4P78413 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 SOX15-203ENST00000570788 1093 ntBASIC20.51■□□□□ 0.87
IRX4P78413 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
IRX4P78413 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 AC069544.1-201ENST00000609399 999 ntBASIC20.51■□□□□ 0.87
IRX4P78413 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.51■□□□□ 0.87
IRX4P78413 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.51■□□□□ 0.87
IRX4P78413 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IRX4P78413 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 KRT18P68-201ENST00000392293 1000 ntBASIC20.5■□□□□ 0.87
IRX4P78413 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.5■□□□□ 0.87
IRX4P78413 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.5■□□□□ 0.87
IRX4P78413 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 AC138932.1-201ENST00000534164 6830 ntBASIC20.5■□□□□ 0.87
IRX4P78413 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.5■□□□□ 0.87
IRX4P78413 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.5■□□□□ 0.87
IRX4P78413 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IRX4P78413 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.5■□□□□ 0.87
IRX4P78413 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.49■□□□□ 0.87
IRX4P78413 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
IRX4P78413 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.49■□□□□ 0.87
IRX4P78413 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
IRX4P78413 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
IRX4P78413 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
IRX4P78413 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
IRX4P78413 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IRX4P78413 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.48■□□□□ 0.87
IRX4P78413 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
IRX4P78413 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 AC245052.3-201ENST00000450182 901 ntBASIC20.48■□□□□ 0.87
IRX4P78413 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
IRX4P78413 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
IRX4P78413 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.48■□□□□ 0.87
IRX4P78413 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.48■□□□□ 0.87
IRX4P78413 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.48■□□□□ 0.87
IRX4P78413 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
IRX4P78413 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms