Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.96■□□□□ 0.79
AP1S1P61966 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.96■□□□□ 0.79
AP1S1P61966 AC133681.1-201ENST00000465482 601 ntBASIC19.96■□□□□ 0.79
AP1S1P61966 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.96■□□□□ 0.79
AP1S1P61966 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.96■□□□□ 0.79
AP1S1P61966 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
AP1S1P61966 C1QBPP2-201ENST00000528754 825 ntBASIC19.96■□□□□ 0.79
AP1S1P61966 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.96■□□□□ 0.79
AP1S1P61966 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
AP1S1P61966 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.96■□□□□ 0.79
AP1S1P61966 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 AL023875.1-201ENST00000640777 796 ntBASIC19.96■□□□□ 0.79
AP1S1P61966 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
AP1S1P61966 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.96■□□□□ 0.79
AP1S1P61966 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
AP1S1P61966 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP1S1P61966 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
AP1S1P61966 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.95■□□□□ 0.78
AP1S1P61966 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
AP1S1P61966 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.95■□□□□ 0.78
AP1S1P61966 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 AC098590.1-201ENST00000468126 897 ntBASIC19.95■□□□□ 0.78
AP1S1P61966 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 RPPH1-201ENST00000516869 333 ntBASIC19.95■□□□□ 0.78
AP1S1P61966 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.95■□□□□ 0.78
AP1S1P61966 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.95■□□□□ 0.78
AP1S1P61966 AC124016.1-201ENST00000609552 612 ntBASIC19.95■□□□□ 0.78
AP1S1P61966 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
AP1S1P61966 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S1P61966 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.95■□□□□ 0.78
AP1S1P61966 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.95■□□□□ 0.78
AP1S1P61966 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 AP006587.1-201ENST00000534129 1502 ntBASIC19.94■□□□□ 0.78
AP1S1P61966 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.94■□□□□ 0.78
AP1S1P61966 KRASP1-201ENST00000407852 552 ntBASIC19.94■□□□□ 0.78
AP1S1P61966 GCSHP5-201ENST00000443090 522 ntBASIC19.94■□□□□ 0.78
AP1S1P61966 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
AP1S1P61966 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.94■□□□□ 0.78
AP1S1P61966 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.94■□□□□ 0.78
AP1S1P61966 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
AP1S1P61966 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.94■□□□□ 0.78
AP1S1P61966 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
AP1S1P61966 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S1P61966 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
AP1S1P61966 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP1S1P61966 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S1P61966 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S1P61966 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S1P61966 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
AP1S1P61966 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S1P61966 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.93■□□□□ 0.78
AP1S1P61966 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
AP1S1P61966 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S1P61966 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.93■□□□□ 0.78
AP1S1P61966 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
AP1S1P61966 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP1S1P61966 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.93■□□□□ 0.78
AP1S1P61966 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.93■□□□□ 0.78
AP1S1P61966 AL359736.2-201ENST00000621992 437 ntBASIC19.93■□□□□ 0.78
AP1S1P61966 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.93■□□□□ 0.78
AP1S1P61966 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.93■□□□□ 0.78
AP1S1P61966 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.93■□□□□ 0.78
AP1S1P61966 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.93■□□□□ 0.78
AP1S1P61966 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms