Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLDN12P56749 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.19■□□□□ 0.34
CLDN12P56749 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 AC007613.1-201ENST00000572811 2597 ntBASIC17.19■□□□□ 0.34
CLDN12P56749 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN12P56749 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN12P56749 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN12P56749 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN12P56749 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN12P56749 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN12P56749 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLDN12P56749 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN12P56749 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLDN12P56749 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN12P56749 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN12P56749 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.18■□□□□ 0.34
CLDN12P56749 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN12P56749 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN12P56749 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN12P56749 CCDC92B-201ENST00000575506 885 ntBASIC17.18■□□□□ 0.34
CLDN12P56749 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN12P56749 AC026471.1-201ENST00000564629 3026 ntBASIC17.18■□□□□ 0.34
CLDN12P56749 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN12P56749 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLDN12P56749 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN12P56749 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN12P56749 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN12P56749 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN12P56749 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN12P56749 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN12P56749 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN12P56749 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN12P56749 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLDN12P56749 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN12P56749 AC009237.14-201ENST00000609975 1594 ntBASIC17.17■□□□□ 0.34
CLDN12P56749 AC243732.1-201ENST00000612648 864 ntBASIC17.17■□□□□ 0.34
CLDN12P56749 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN12P56749 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN12P56749 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN12P56749 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN12P56749 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN12P56749 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN12P56749 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CLDN12P56749 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms