Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S2P56377 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.28■□□□□ 0.68
AP1S2P56377 AC116351.2-201ENST00000606540 1585 ntBASIC19.28■□□□□ 0.68
AP1S2P56377 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S2P56377 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S2P56377 ID1-201ENST00000376105 1233 ntBASIC19.28■□□□□ 0.68
AP1S2P56377 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.28■□□□□ 0.68
AP1S2P56377 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
AP1S2P56377 PNMA6B-201ENST00000538162 1200 ntBASIC19.28■□□□□ 0.68
AP1S2P56377 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.28■□□□□ 0.68
AP1S2P56377 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S2P56377 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.28■□□□□ 0.68
AP1S2P56377 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S2P56377 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S2P56377 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 RNF165-205ENST00000588679 2904 ntBASIC19.27■□□□□ 0.68
AP1S2P56377 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S2P56377 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S2P56377 AL355802.2-201ENST00000402069 882 ntBASIC19.27■□□□□ 0.68
AP1S2P56377 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S2P56377 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
AP1S2P56377 AC125437.2-201ENST00000625180 2167 ntBASIC19.27■□□□□ 0.68
AP1S2P56377 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP1S2P56377 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP1S2P56377 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AP1S2P56377 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
AP1S2P56377 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.27■□□□□ 0.67
AP1S2P56377 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP1S2P56377 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.26■□□□□ 0.67
AP1S2P56377 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
AP1S2P56377 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.26■□□□□ 0.67
AP1S2P56377 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.26■□□□□ 0.67
AP1S2P56377 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.26■□□□□ 0.67
AP1S2P56377 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.26■□□□□ 0.67
AP1S2P56377 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
AP1S2P56377 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.26■□□□□ 0.67
AP1S2P56377 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.26■□□□□ 0.67
AP1S2P56377 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 AC018553.1-201ENST00000616682 1458 ntBASIC19.26■□□□□ 0.67
AP1S2P56377 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.26■□□□□ 0.67
AP1S2P56377 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
AP1S2P56377 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
AP1S2P56377 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.26■□□□□ 0.67
AP1S2P56377 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
AP1S2P56377 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S2P56377 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S2P56377 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
AP1S2P56377 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
AP1S2P56377 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
AP1S2P56377 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
AP1S2P56377 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S2P56377 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.25■□□□□ 0.67
AP1S2P56377 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.25■□□□□ 0.67
AP1S2P56377 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S2P56377 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.25■□□□□ 0.67
AP1S2P56377 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.25■□□□□ 0.67
AP1S2P56377 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S2P56377 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.25■□□□□ 0.67
AP1S2P56377 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.25■□□□□ 0.67
AP1S2P56377 AC006557.6-201ENST00000623071 864 ntBASIC19.25■□□□□ 0.67
AP1S2P56377 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S2P56377 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms