Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP1B3P54709 DUX4L16-201ENST00000555130 1264 ntBASIC17.15■□□□□ 0.34
ATP1B3P54709 AC069236.1-201ENST00000604339 616 ntBASIC17.15■□□□□ 0.34
ATP1B3P54709 AC011767.1-201ENST00000617410 1153 ntBASIC17.15■□□□□ 0.34
ATP1B3P54709 AC008694.1-202ENST00000636953 945 ntBASIC17.15■□□□□ 0.34
ATP1B3P54709 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP1B3P54709 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP1B3P54709 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP1B3P54709 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ATP1B3P54709 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.14■□□□□ 0.34
ATP1B3P54709 AL691432.2-201ENST00000607222 2038 ntBASIC17.14■□□□□ 0.34
ATP1B3P54709 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ATP1B3P54709 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ATP1B3P54709 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATP1B3P54709 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATP1B3P54709 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP1B3P54709 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATP1B3P54709 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATP1B3P54709 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP1B3P54709 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ATP1B3P54709 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 AC004408.2-201ENST00000623613 2777 ntBASIC17.14■□□□□ 0.33
ATP1B3P54709 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
ATP1B3P54709 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1B3P54709 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ATP1B3P54709 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1B3P54709 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1B3P54709 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP1B3P54709 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1B3P54709 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATP1B3P54709 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP1B3P54709 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP1B3P54709 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1B3P54709 RARRES2P6-201ENST00000567333 442 ntBASIC17.13■□□□□ 0.33
ATP1B3P54709 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.13■□□□□ 0.33
ATP1B3P54709 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.13■□□□□ 0.33
ATP1B3P54709 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ATP1B3P54709 BID-214ENST00000617586 542 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP1B3P54709 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 AC231657.2-201ENST00000624556 255 ntBASIC17.13■□□□□ 0.33
ATP1B3P54709 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.13■□□□□ 0.33
ATP1B3P54709 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP1B3P54709 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1B3P54709 TNXA-203ENST00000507684 2038 ntBASIC17.13■□□□□ 0.33
ATP1B3P54709 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1B3P54709 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1B3P54709 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1B3P54709 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ATP1B3P54709 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ATP1B3P54709 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP1B3P54709 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1B3P54709 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP1B3P54709 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 KRT18P68-201ENST00000392293 1000 ntBASIC17.12■□□□□ 0.33
ATP1B3P54709 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1B3P54709 AC026271.2-201ENST00000428091 497 ntBASIC17.12■□□□□ 0.33
ATP1B3P54709 AC006015.1-201ENST00000429970 570 ntBASIC17.12■□□□□ 0.33
ATP1B3P54709 CNN2P6-201ENST00000439038 900 ntBASIC17.12■□□□□ 0.33
ATP1B3P54709 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1B3P54709 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1B3P54709 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1B3P54709 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1B3P54709 KRT8P17-201ENST00000453110 1448 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms