Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.16■□□□□ 0.82
ATXN3P54252 AL049796.1-201ENST00000565336 1766 ntBASIC20.16■□□□□ 0.82
ATXN3P54252 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.16■□□□□ 0.82
ATXN3P54252 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.16■□□□□ 0.82
ATXN3P54252 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.16■□□□□ 0.82
ATXN3P54252 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.16■□□□□ 0.82
ATXN3P54252 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 PRKY-204ENST00000533551 1019 ntBASIC20.16■□□□□ 0.82
ATXN3P54252 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.16■□□□□ 0.82
ATXN3P54252 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ATXN3P54252 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATXN3P54252 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.16■□□□□ 0.82
ATXN3P54252 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATXN3P54252 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATXN3P54252 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATXN3P54252 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATXN3P54252 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.15■□□□□ 0.82
ATXN3P54252 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.15■□□□□ 0.82
ATXN3P54252 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.15■□□□□ 0.82
ATXN3P54252 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.15■□□□□ 0.82
ATXN3P54252 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATXN3P54252 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.15■□□□□ 0.82
ATXN3P54252 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.15■□□□□ 0.82
ATXN3P54252 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATXN3P54252 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ATXN3P54252 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.15■□□□□ 0.82
ATXN3P54252 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ATXN3P54252 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.14■□□□□ 0.82
ATXN3P54252 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ATXN3P54252 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.14■□□□□ 0.82
ATXN3P54252 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ATXN3P54252 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
ATXN3P54252 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ATXN3P54252 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.14■□□□□ 0.81
ATXN3P54252 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.14■□□□□ 0.81
ATXN3P54252 PGM5P4-201ENST00000421970 445 ntBASIC20.14■□□□□ 0.81
ATXN3P54252 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ATXN3P54252 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ATXN3P54252 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ATXN3P54252 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ATXN3P54252 AC006557.6-201ENST00000623071 864 ntBASIC20.14■□□□□ 0.81
ATXN3P54252 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATXN3P54252 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
ATXN3P54252 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.13■□□□□ 0.81
ATXN3P54252 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.13■□□□□ 0.81
ATXN3P54252 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ATXN3P54252 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 AC073314.1-201ENST00000568729 2216 ntBASIC20.13■□□□□ 0.81
ATXN3P54252 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.13■□□□□ 0.81
ATXN3P54252 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.13■□□□□ 0.81
ATXN3P54252 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.13■□□□□ 0.81
ATXN3P54252 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.13■□□□□ 0.81
ATXN3P54252 AC113410.3-201ENST00000623366 203 ntBASIC20.13■□□□□ 0.81
ATXN3P54252 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ATXN3P54252 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATXN3P54252 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms