Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CLCNKAP51800 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCNKAP51800 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLCNKAP51800 AL162377.1-201ENST00000618844 1793 ntBASIC19.42■□□□□ 0.7
CLCNKAP51800 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.42■□□□□ 0.7
CLCNKAP51800 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCNKAP51800 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.42■□□□□ 0.7
CLCNKAP51800 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.42■□□□□ 0.7
CLCNKAP51800 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLCNKAP51800 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCNKAP51800 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCNKAP51800 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCNKAP51800 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCNKAP51800 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCNKAP51800 AC116351.2-201ENST00000606540 1585 ntBASIC19.41■□□□□ 0.7
CLCNKAP51800 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCNKAP51800 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCNKAP51800 MIR718-201ENST00000390190 70 ntBASIC19.41■□□□□ 0.7
CLCNKAP51800 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCNKAP51800 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCNKAP51800 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCNKAP51800 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCNKAP51800 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCNKAP51800 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCNKAP51800 NBPF21P-201ENST00000425093 1451 ntBASIC19.41■□□□□ 0.7
CLCNKAP51800 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCNKAP51800 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLCNKAP51800 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCNKAP51800 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CLCNKAP51800 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 KRT16P5-201ENST00000455284 522 ntBASIC19.4■□□□□ 0.7
CLCNKAP51800 RPS2P4-201ENST00000476944 856 ntBASIC19.4■□□□□ 0.7
CLCNKAP51800 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CLCNKAP51800 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCNKAP51800 RARRES2P10-201ENST00000564312 460 ntBASIC19.4■□□□□ 0.7
CLCNKAP51800 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCNKAP51800 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCNKAP51800 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLCNKAP51800 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCNKAP51800 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLCNKAP51800 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLCNKAP51800 AC012618.2-201ENST00000428058 849 ntBASIC19.39■□□□□ 0.69
CLCNKAP51800 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.39■□□□□ 0.69
CLCNKAP51800 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCNKAP51800 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.39■□□□□ 0.69
CLCNKAP51800 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCNKAP51800 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CLCNKAP51800 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLCNKAP51800 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.39■□□□□ 0.69
CLCNKAP51800 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCNKAP51800 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCNKAP51800 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCNKAP51800 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms