Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX1P48742 YBX1P10-201ENST00000444752 975 ntBASIC21.01■□□□□ 0.95
LHX1P48742 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.01■□□□□ 0.95
LHX1P48742 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX1P48742 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LHX1P48742 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.01■□□□□ 0.95
LHX1P48742 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX1P48742 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX1P48742 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX1P48742 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.01■□□□□ 0.95
LHX1P48742 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX1P48742 LINC01006-201ENST00000333319 2292 ntBASIC21.01■□□□□ 0.95
LHX1P48742 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LHX1P48742 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.01■□□□□ 0.95
LHX1P48742 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21■□□□□ 0.95
LHX1P48742 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21■□□□□ 0.95
LHX1P48742 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LHX1P48742 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21■□□□□ 0.95
LHX1P48742 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21■□□□□ 0.95
LHX1P48742 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21■□□□□ 0.95
LHX1P48742 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21■□□□□ 0.95
LHX1P48742 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 HTR7P1-201ENST00000538670 1336 ntBASIC21■□□□□ 0.95
LHX1P48742 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
LHX1P48742 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LHX1P48742 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX1P48742 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
LHX1P48742 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LHX1P48742 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX1P48742 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LHX1P48742 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 AL353807.1-201ENST00000427475 662 ntBASIC20.99■□□□□ 0.95
LHX1P48742 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.99■□□□□ 0.95
LHX1P48742 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.99■□□□□ 0.95
LHX1P48742 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LHX1P48742 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.99■□□□□ 0.95
LHX1P48742 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX1P48742 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
LHX1P48742 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LHX1P48742 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LHX1P48742 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LHX1P48742 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LHX1P48742 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LHX1P48742 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX1P48742 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LHX1P48742 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX1P48742 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
LHX1P48742 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.98■□□□□ 0.95
LHX1P48742 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
LHX1P48742 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.98■□□□□ 0.95
LHX1P48742 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.98■□□□□ 0.95
LHX1P48742 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX1P48742 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.98■□□□□ 0.95
LHX1P48742 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.98■□□□□ 0.95
LHX1P48742 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LHX1P48742 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LHX1P48742 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.97■□□□□ 0.95
LHX1P48742 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 AL596275.1-201ENST00000423464 877 ntBASIC20.97■□□□□ 0.95
LHX1P48742 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LHX1P48742 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.97■□□□□ 0.95
LHX1P48742 AL049637.2-201ENST00000641778 930 ntBASIC20.97■□□□□ 0.95
LHX1P48742 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms