Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.91■□□□□ 0.78
CSNK1DP48730 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.91■□□□□ 0.78
CSNK1DP48730 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.91■□□□□ 0.78
CSNK1DP48730 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CSNK1DP48730 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CSNK1DP48730 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1DP48730 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CSNK1DP48730 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CSNK1DP48730 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.91■□□□□ 0.78
CSNK1DP48730 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1DP48730 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.9■□□□□ 0.78
CSNK1DP48730 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.9■□□□□ 0.78
CSNK1DP48730 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.9■□□□□ 0.78
CSNK1DP48730 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.9■□□□□ 0.78
CSNK1DP48730 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.9■□□□□ 0.78
CSNK1DP48730 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.9■□□□□ 0.78
CSNK1DP48730 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CSNK1DP48730 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1DP48730 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CSNK1DP48730 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.89■□□□□ 0.77
CSNK1DP48730 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.89■□□□□ 0.77
CSNK1DP48730 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.89■□□□□ 0.77
CSNK1DP48730 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.89■□□□□ 0.77
CSNK1DP48730 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CSNK1DP48730 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.89■□□□□ 0.77
CSNK1DP48730 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.89■□□□□ 0.77
CSNK1DP48730 KRT18P16-201ENST00000510337 1294 ntBASIC19.89■□□□□ 0.77
CSNK1DP48730 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.89■□□□□ 0.77
CSNK1DP48730 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.89■□□□□ 0.77
CSNK1DP48730 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.89■□□□□ 0.77
CSNK1DP48730 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.89■□□□□ 0.77
CSNK1DP48730 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CSNK1DP48730 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.89■□□□□ 0.77
CSNK1DP48730 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CSNK1DP48730 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.77
CSNK1DP48730 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1DP48730 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CSNK1DP48730 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CSNK1DP48730 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CSNK1DP48730 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.88■□□□□ 0.77
CSNK1DP48730 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CSNK1DP48730 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.88■□□□□ 0.77
CSNK1DP48730 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.88■□□□□ 0.77
CSNK1DP48730 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.88■□□□□ 0.77
CSNK1DP48730 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1DP48730 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1DP48730 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSNK1DP48730 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CSNK1DP48730 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CSNK1DP48730 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.87■□□□□ 0.77
CSNK1DP48730 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CSNK1DP48730 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.87■□□□□ 0.77
CSNK1DP48730 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.87■□□□□ 0.77
CSNK1DP48730 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1DP48730 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms