Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NKX2-1P43699 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX2-1P43699 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX2-1P43699 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NKX2-1P43699 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.19■□□□□ 0.18
NKX2-1P43699 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-1P43699 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.18■□□□□ 0.18
NKX2-1P43699 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 AC009237.14-201ENST00000609975 1594 ntBASIC16.18■□□□□ 0.18
NKX2-1P43699 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NKX2-1P43699 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 AC026471.1-201ENST00000564629 3026 ntBASIC16.18■□□□□ 0.18
NKX2-1P43699 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NKX2-1P43699 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NKX2-1P43699 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX2-1P43699 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX2-1P43699 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-1P43699 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NKX2-1P43699 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 AC096631.2-201ENST00000436136 790 ntBASIC16.17■□□□□ 0.18
NKX2-1P43699 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.17■□□□□ 0.18
NKX2-1P43699 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.17■□□□□ 0.18
NKX2-1P43699 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX2-1P43699 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.17■□□□□ 0.18
NKX2-1P43699 AC079140.4-201ENST00000507448 529 ntBASIC16.17■□□□□ 0.18
NKX2-1P43699 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 AC027682.1-201ENST00000562846 899 ntBASIC16.17■□□□□ 0.18
NKX2-1P43699 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NKX2-1P43699 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
NKX2-1P43699 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-1P43699 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NKX2-1P43699 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-1P43699 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-1P43699 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-1P43699 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-1P43699 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.16■□□□□ 0.18
NKX2-1P43699 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-1P43699 AC007322.3-201ENST00000426526 701 ntBASIC16.16■□□□□ 0.18
NKX2-1P43699 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-1P43699 AL138781.2-201ENST00000617896 1843 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms