Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.66■□□□□ 0.9
SCNN1AP37088 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SCNN1AP37088 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SCNN1AP37088 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.65■□□□□ 0.9
SCNN1AP37088 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SCNN1AP37088 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.65■□□□□ 0.9
SCNN1AP37088 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.65■□□□□ 0.9
SCNN1AP37088 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 ESRRAP1-201ENST00000400596 1257 ntBASIC20.65■□□□□ 0.9
SCNN1AP37088 KRT17P3-201ENST00000420566 1262 ntBASIC20.65■□□□□ 0.9
SCNN1AP37088 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.65■□□□□ 0.9
SCNN1AP37088 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.65■□□□□ 0.9
SCNN1AP37088 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCNN1AP37088 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SCNN1AP37088 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCNN1AP37088 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.64■□□□□ 0.9
SCNN1AP37088 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.64■□□□□ 0.9
SCNN1AP37088 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCNN1AP37088 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCNN1AP37088 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCNN1AP37088 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.64■□□□□ 0.89
SCNN1AP37088 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCNN1AP37088 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
SCNN1AP37088 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCNN1AP37088 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCNN1AP37088 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.64■□□□□ 0.89
SCNN1AP37088 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.64■□□□□ 0.89
SCNN1AP37088 AC069544.1-201ENST00000609399 999 ntBASIC20.64■□□□□ 0.89
SCNN1AP37088 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCNN1AP37088 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SCNN1AP37088 AC125437.2-201ENST00000625180 2167 ntBASIC20.63■□□□□ 0.89
SCNN1AP37088 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.63■□□□□ 0.89
SCNN1AP37088 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCNN1AP37088 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 YBX1P10-201ENST00000444752 975 ntBASIC20.63■□□□□ 0.89
SCNN1AP37088 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.63■□□□□ 0.89
SCNN1AP37088 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.63■□□□□ 0.89
SCNN1AP37088 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SCNN1AP37088 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SCNN1AP37088 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.63■□□□□ 0.89
SCNN1AP37088 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCNN1AP37088 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
SCNN1AP37088 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCNN1AP37088 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SCNN1AP37088 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCNN1AP37088 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
SCNN1AP37088 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.62■□□□□ 0.89
SCNN1AP37088 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.62■□□□□ 0.89
SCNN1AP37088 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.62■□□□□ 0.89
SCNN1AP37088 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.62■□□□□ 0.89
SCNN1AP37088 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.62■□□□□ 0.89
SCNN1AP37088 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.62■□□□□ 0.89
SCNN1AP37088 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SCNN1AP37088 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.62■□□□□ 0.89
SCNN1AP37088 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCNN1AP37088 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.61■□□□□ 0.89
SCNN1AP37088 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.61■□□□□ 0.89
SCNN1AP37088 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
SCNN1AP37088 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCNN1AP37088 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCNN1AP37088 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCNN1AP37088 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.61■□□□□ 0.89
SCNN1AP37088 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms