Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.56□□□□□ -0.08
CKS2P33552 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS2P33552 AC053503.5-201ENST00000601508 636 ntBASIC14.56□□□□□ -0.08
CKS2P33552 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.56□□□□□ -0.08
CKS2P33552 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CKS2P33552 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CKS2P33552 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.56□□□□□ -0.08
CKS2P33552 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CKS2P33552 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS2P33552 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CKS2P33552 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.55□□□□□ -0.08
CKS2P33552 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.55□□□□□ -0.08
CKS2P33552 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CKS2P33552 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CKS2P33552 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CKS2P33552 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CKS2P33552 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.55□□□□□ -0.08
CKS2P33552 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CKS2P33552 AL138781.2-201ENST00000617896 1843 ntBASIC14.55□□□□□ -0.08
CKS2P33552 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKS2P33552 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CKS2P33552 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CKS2P33552 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.54□□□□□ -0.08
CKS2P33552 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.54□□□□□ -0.08
CKS2P33552 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CKS2P33552 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CKS2P33552 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CKS2P33552 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CKS2P33552 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.54□□□□□ -0.08
CKS2P33552 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CKS2P33552 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CKS2P33552 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS2P33552 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.53□□□□□ -0.08
CKS2P33552 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS2P33552 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CKS2P33552 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS2P33552 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.53□□□□□ -0.08
CKS2P33552 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKS2P33552 AC245052.3-201ENST00000450182 901 ntBASIC14.53□□□□□ -0.08
CKS2P33552 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
CKS2P33552 EEF1DP3-203ENST00000566025 782 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms