Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN3P20807 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CAPN3P20807 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CAPN3P20807 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN3P20807 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CAPN3P20807 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.02■□□□□ 0.64
CAPN3P20807 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN3P20807 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN3P20807 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN3P20807 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.02■□□□□ 0.64
CAPN3P20807 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CAPN3P20807 PGM5P4-201ENST00000421970 445 ntBASIC19.02■□□□□ 0.64
CAPN3P20807 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN3P20807 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN3P20807 UBE2DNL-204ENST00000602536 740 ntBASIC19.02■□□□□ 0.64
CAPN3P20807 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.02■□□□□ 0.64
CAPN3P20807 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN3P20807 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN3P20807 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN3P20807 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN3P20807 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CAPN3P20807 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CAPN3P20807 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN3P20807 CYP21A1P-202ENST00000354927 1481 ntBASIC19.02■□□□□ 0.63
CAPN3P20807 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN3P20807 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.02■□□□□ 0.63
CAPN3P20807 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN3P20807 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN3P20807 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CAPN3P20807 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CAPN3P20807 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN3P20807 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.01■□□□□ 0.63
CAPN3P20807 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN3P20807 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN3P20807 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN3P20807 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN3P20807 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN3P20807 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19■□□□□ 0.63
CAPN3P20807 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CAPN3P20807 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CAPN3P20807 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CAPN3P20807 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN3P20807 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 AC093503.3-201ENST00000624917 2352 ntBASIC18.99■□□□□ 0.63
CAPN3P20807 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.99■□□□□ 0.63
CAPN3P20807 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CAPN3P20807 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CAPN3P20807 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.99■□□□□ 0.63
CAPN3P20807 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN3P20807 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.99■□□□□ 0.63
CAPN3P20807 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN3P20807 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN3P20807 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.99■□□□□ 0.63
CAPN3P20807 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN3P20807 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN3P20807 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN3P20807 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CAPN3P20807 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms