Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD58P19256 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.27■■□□□ 1
CD58P19256 RPS2P52-201ENST00000469610 820 ntBASIC21.27■■□□□ 1
CD58P19256 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CD58P19256 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.27■■□□□ 1
CD58P19256 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD58P19256 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.27■■□□□ 1
CD58P19256 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.27■■□□□ 1
CD58P19256 AC008403.3-201ENST00000598924 454 ntBASIC21.27■■□□□ 1
CD58P19256 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD58P19256 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.27■■□□□ 1
CD58P19256 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD58P19256 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD58P19256 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD58P19256 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CD58P19256 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.26■□□□□ 0.99
CD58P19256 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CD58P19256 ESRRAP1-201ENST00000400596 1257 ntBASIC21.26■□□□□ 0.99
CD58P19256 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CD58P19256 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.26■□□□□ 0.99
CD58P19256 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CD58P19256 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CD58P19256 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CD58P19256 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.26■□□□□ 0.99
CD58P19256 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD58P19256 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.25■□□□□ 0.99
CD58P19256 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CD58P19256 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.25■□□□□ 0.99
CD58P19256 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.25■□□□□ 0.99
CD58P19256 AC120498.8-201ENST00000614275 531 ntBASIC21.25■□□□□ 0.99
CD58P19256 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.25■□□□□ 0.99
CD58P19256 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.25■□□□□ 0.99
CD58P19256 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.25■□□□□ 0.99
CD58P19256 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD58P19256 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.24■□□□□ 0.99
CD58P19256 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD58P19256 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.24■□□□□ 0.99
CD58P19256 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CD58P19256 AC026366.1-201ENST00000488803 879 ntBASIC21.24■□□□□ 0.99
CD58P19256 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.24■□□□□ 0.99
CD58P19256 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.24■□□□□ 0.99
CD58P19256 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.24■□□□□ 0.99
CD58P19256 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.24■□□□□ 0.99
CD58P19256 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.24■□□□□ 0.99
CD58P19256 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD58P19256 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.23■□□□□ 0.99
CD58P19256 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 PHGDH-210ENST00000641115 1638 ntBASIC21.23■□□□□ 0.99
CD58P19256 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.23■□□□□ 0.99
CD58P19256 TSPY20P-201ENST00000450910 630 ntBASIC21.23■□□□□ 0.99
CD58P19256 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.23■□□□□ 0.99
CD58P19256 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.23■□□□□ 0.99
CD58P19256 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.23■□□□□ 0.99
CD58P19256 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD58P19256 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.23■□□□□ 0.99
CD58P19256 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.22■□□□□ 0.99
CD58P19256 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CD58P19256 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.22■□□□□ 0.99
CD58P19256 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.22■□□□□ 0.99
CD58P19256 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms