Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PSMC3P17980 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PSMC3P17980 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSMC3P17980 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMC3P17980 Z98882.1-201ENST00000622160 2253 ntBASIC20.66■□□□□ 0.9
PSMC3P17980 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSMC3P17980 TMPOP1-202ENST00000424642 1267 ntBASIC20.66■□□□□ 0.9
PSMC3P17980 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMC3P17980 NUDT16P1-203ENST00000513809 620 ntBASIC20.66■□□□□ 0.9
PSMC3P17980 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.66■□□□□ 0.9
PSMC3P17980 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PSMC3P17980 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PSMC3P17980 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMC3P17980 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSMC3P17980 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSMC3P17980 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.66■□□□□ 0.9
PSMC3P17980 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PSMC3P17980 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.66■□□□□ 0.9
PSMC3P17980 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PSMC3P17980 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSMC3P17980 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PSMC3P17980 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSMC3P17980 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PSMC3P17980 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSMC3P17980 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PSMC3P17980 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.65■□□□□ 0.9
PSMC3P17980 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PSMC3P17980 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.65■□□□□ 0.9
PSMC3P17980 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.65■□□□□ 0.9
PSMC3P17980 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.65■□□□□ 0.9
PSMC3P17980 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSMC3P17980 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PSMC3P17980 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PSMC3P17980 AC121338.2-201ENST00000622535 1744 ntBASIC20.64■□□□□ 0.9
PSMC3P17980 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.64■□□□□ 0.9
PSMC3P17980 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PSMC3P17980 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PSMC3P17980 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 UNC93B2-201ENST00000285383 730 ntBASIC20.64■□□□□ 0.89
PSMC3P17980 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PSMC3P17980 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 RBM17P1-201ENST00000453646 1190 ntBASIC20.64■□□□□ 0.89
PSMC3P17980 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.64■□□□□ 0.89
PSMC3P17980 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.64■□□□□ 0.89
PSMC3P17980 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.64■□□□□ 0.89
PSMC3P17980 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
PSMC3P17980 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.64■□□□□ 0.89
PSMC3P17980 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.64■□□□□ 0.89
PSMC3P17980 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.64■□□□□ 0.89
PSMC3P17980 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.64■□□□□ 0.89
PSMC3P17980 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSMC3P17980 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PSMC3P17980 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
PSMC3P17980 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.63■□□□□ 0.89
PSMC3P17980 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.63■□□□□ 0.89
PSMC3P17980 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PSMC3P17980 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.63■□□□□ 0.89
PSMC3P17980 RN7SL850P-201ENST00000579959 291 ntBASIC20.63■□□□□ 0.89
PSMC3P17980 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.63■□□□□ 0.89
PSMC3P17980 AC145285.6-201ENST00000604632 637 ntBASIC20.63■□□□□ 0.89
PSMC3P17980 REXO1L10P-201ENST00000615707 1290 ntBASIC20.63■□□□□ 0.89
PSMC3P17980 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PSMC3P17980 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSMC3P17980 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMC3P17980 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PSMC3P17980 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMC3P17980 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PSMC3P17980 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 MIR6786-201ENST00000616843 113 ntBASIC20.62■□□□□ 0.89
PSMC3P17980 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.62■□□□□ 0.89
PSMC3P17980 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMC3P17980 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMC3P17980 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMC3P17980 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PSMC3P17980 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PSMC3P17980 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.61■□□□□ 0.89
PSMC3P17980 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms