Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFP11831 FAM86EP-206ENST00000510506 987 ntBASIC20.15■□□□□ 0.82
SRFP11831 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
SRFP11831 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFP11831 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
SRFP11831 AC141257.4-201ENST00000634557 245 ntBASIC20.15■□□□□ 0.82
SRFP11831 AC136944.6-201ENST00000634818 245 ntBASIC20.15■□□□□ 0.82
SRFP11831 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFP11831 KRT16P6-202ENST00000425692 1426 ntBASIC20.15■□□□□ 0.82
SRFP11831 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.15■□□□□ 0.82
SRFP11831 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRFP11831 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SRFP11831 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFP11831 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRFP11831 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SRFP11831 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SRFP11831 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SRFP11831 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.14■□□□□ 0.81
SRFP11831 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SRFP11831 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SRFP11831 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SRFP11831 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.14■□□□□ 0.81
SRFP11831 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.14■□□□□ 0.81
SRFP11831 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.14■□□□□ 0.81
SRFP11831 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.14■□□□□ 0.81
SRFP11831 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SRFP11831 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.14■□□□□ 0.81
SRFP11831 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.14■□□□□ 0.81
SRFP11831 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.14■□□□□ 0.81
SRFP11831 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.14■□□□□ 0.81
SRFP11831 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SRFP11831 AL121603.2-201ENST00000557373 2117 ntBASIC20.14■□□□□ 0.81
SRFP11831 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SRFP11831 AC092338.2-201ENST00000568827 1415 ntBASIC20.13■□□□□ 0.81
SRFP11831 IER3-202ENST00000376377 1350 ntBASIC20.13■□□□□ 0.81
SRFP11831 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFP11831 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.13■□□□□ 0.81
SRFP11831 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.13■□□□□ 0.81
SRFP11831 HOMER2P1-201ENST00000455653 964 ntBASIC20.13■□□□□ 0.81
SRFP11831 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.13■□□□□ 0.81
SRFP11831 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.13■□□□□ 0.81
SRFP11831 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.13■□□□□ 0.81
SRFP11831 AL512604.3-201ENST00000569583 964 ntBASIC20.13■□□□□ 0.81
SRFP11831 AC011558.1-201ENST00000623459 338 ntBASIC20.13■□□□□ 0.81
SRFP11831 HLA-A-209ENST00000638375 975 ntBASIC20.13■□□□□ 0.81
SRFP11831 AL031432.5-201ENST00000641059 760 ntBASIC20.13■□□□□ 0.81
SRFP11831 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFP11831 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.13■□□□□ 0.81
SRFP11831 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SRFP11831 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.12■□□□□ 0.81
SRFP11831 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.12■□□□□ 0.81
SRFP11831 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.12■□□□□ 0.81
SRFP11831 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.12■□□□□ 0.81
SRFP11831 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.12■□□□□ 0.81
SRFP11831 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SRFP11831 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.12■□□□□ 0.81
SRFP11831 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.12■□□□□ 0.81
SRFP11831 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SRFP11831 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.11■□□□□ 0.81
SRFP11831 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.11■□□□□ 0.81
SRFP11831 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.11■□□□□ 0.81
SRFP11831 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.11■□□□□ 0.81
SRFP11831 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.11■□□□□ 0.81
SRFP11831 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
SRFP11831 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SRFP11831 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.11■□□□□ 0.81
SRFP11831 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SRFP11831 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms