Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.51■□□□□ 0.39
ERCC1P07992 AC091874.3-201ENST00000512672 1195 ntBASIC17.51■□□□□ 0.39
ERCC1P07992 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.51■□□□□ 0.39
ERCC1P07992 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.51■□□□□ 0.39
ERCC1P07992 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.51■□□□□ 0.39
ERCC1P07992 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.51■□□□□ 0.39
ERCC1P07992 CYP2T3P-201ENST00000601990 817 ntBASIC17.51■□□□□ 0.39
ERCC1P07992 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC1P07992 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC1P07992 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.51■□□□□ 0.39
ERCC1P07992 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.51■□□□□ 0.39
ERCC1P07992 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC1P07992 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC1P07992 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC1P07992 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ERCC1P07992 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
ERCC1P07992 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC1P07992 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC1P07992 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC1P07992 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC1P07992 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.5■□□□□ 0.39
ERCC1P07992 TSPY20P-201ENST00000450910 630 ntBASIC17.5■□□□□ 0.39
ERCC1P07992 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC1P07992 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ERCC1P07992 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC1P07992 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC1P07992 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC1P07992 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ERCC1P07992 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC1P07992 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 AC087289.5-201ENST00000586076 3175 ntBASIC17.5■□□□□ 0.39
ERCC1P07992 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC1P07992 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC1P07992 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC1P07992 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC1P07992 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
ERCC1P07992 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC1P07992 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 SMG8-203ENST00000578922 2178 ntBASIC17.49■□□□□ 0.39
ERCC1P07992 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC1P07992 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 KRT18P68-201ENST00000392293 1000 ntBASIC17.49■□□□□ 0.39
ERCC1P07992 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
ERCC1P07992 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC1P07992 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ERCC1P07992 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC1P07992 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC1P07992 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC1P07992 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.48■□□□□ 0.39
ERCC1P07992 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC1P07992 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ERCC1P07992 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC1P07992 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.48■□□□□ 0.39
ERCC1P07992 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC1P07992 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms