Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR3DP05423 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR3DP05423 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR3DP05423 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR3DP05423 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
POLR3DP05423 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.68■■□□□ 1.38
POLR3DP05423 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
POLR3DP05423 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
POLR3DP05423 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.68■■□□□ 1.38
POLR3DP05423 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.68■■□□□ 1.38
POLR3DP05423 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.68■■□□□ 1.38
POLR3DP05423 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
POLR3DP05423 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR3DP05423 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
POLR3DP05423 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
POLR3DP05423 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
POLR3DP05423 SNORA78-201ENST00000459373 127 ntBASIC23.68■■□□□ 1.38
POLR3DP05423 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.68■■□□□ 1.38
POLR3DP05423 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.68■■□□□ 1.38
POLR3DP05423 MIR4497-201ENST00000583208 89 ntBASIC23.68■■□□□ 1.38
POLR3DP05423 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR3DP05423 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR3DP05423 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
POLR3DP05423 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 GABARAPL3-202ENST00000624044 1851 ntBASIC23.67■■□□□ 1.38
POLR3DP05423 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 AC012618.2-201ENST00000428058 849 ntBASIC23.67■■□□□ 1.38
POLR3DP05423 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.67■■□□□ 1.38
POLR3DP05423 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 AC233702.5-201ENST00000584107 538 ntBASIC23.67■■□□□ 1.38
POLR3DP05423 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
POLR3DP05423 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
POLR3DP05423 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR3DP05423 AL391422.3-201ENST00000603791 2761 ntBASIC23.67■■□□□ 1.38
POLR3DP05423 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.66■■□□□ 1.38
POLR3DP05423 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.66■■□□□ 1.38
POLR3DP05423 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.66■■□□□ 1.38
POLR3DP05423 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.66■■□□□ 1.38
POLR3DP05423 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
POLR3DP05423 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.66■■□□□ 1.38
POLR3DP05423 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
POLR3DP05423 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
POLR3DP05423 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 SMG8-203ENST00000578922 2178 ntBASIC23.65■■□□□ 1.38
POLR3DP05423 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
POLR3DP05423 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
POLR3DP05423 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.65■■□□□ 1.38
POLR3DP05423 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
POLR3DP05423 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.65■■□□□ 1.38
POLR3DP05423 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
POLR3DP05423 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.65■■□□□ 1.38
POLR3DP05423 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
POLR3DP05423 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.65■■□□□ 1.38
POLR3DP05423 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.65■■□□□ 1.38
POLR3DP05423 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
POLR3DP05423 AL135905.2-201ENST00000584934 1404 ntBASIC23.65■■□□□ 1.38
POLR3DP05423 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.65■■□□□ 1.38
POLR3DP05423 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
POLR3DP05423 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
POLR3DP05423 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
POLR3DP05423 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.64■■□□□ 1.38
POLR3DP05423 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
POLR3DP05423 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
POLR3DP05423 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
POLR3DP05423 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
POLR3DP05423 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
POLR3DP05423 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.64■■□□□ 1.37
POLR3DP05423 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
POLR3DP05423 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
POLR3DP05423 RARRES2P10-201ENST00000564312 460 ntBASIC23.64■■□□□ 1.37
POLR3DP05423 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms