Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGN1P05114 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 KRT8P20-201ENST00000423953 1409 ntBASIC17.9■□□□□ 0.46
HMGN1P05114 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGN1P05114 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGN1P05114 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HMGN1P05114 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGN1P05114 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGN1P05114 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGN1P05114 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 AC010536.3-201ENST00000620306 533 ntBASIC17.9■□□□□ 0.46
HMGN1P05114 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HMGN1P05114 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HMGN1P05114 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGN1P05114 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGN1P05114 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGN1P05114 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGN1P05114 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
HMGN1P05114 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGN1P05114 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGN1P05114 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGN1P05114 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HMGN1P05114 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGN1P05114 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
HMGN1P05114 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGN1P05114 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGN1P05114 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGN1P05114 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGN1P05114 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HMGN1P05114 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGN1P05114 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMGN1P05114 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGN1P05114 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGN1P05114 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HMGN1P05114 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGN1P05114 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HMGN1P05114 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGN1P05114 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 AC007322.4-201ENST00000509611 723 ntBASIC17.88■□□□□ 0.45
HMGN1P05114 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGN1P05114 AC100791.3-201ENST00000617619 330 ntBASIC17.88■□□□□ 0.45
HMGN1P05114 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGN1P05114 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGN1P05114 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.88■□□□□ 0.45
HMGN1P05114 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGN1P05114 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGN1P05114 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms