Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TYMSP04818 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.22■□□□□ 0.03
TYMSP04818 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.22■□□□□ 0.03
TYMSP04818 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.22■□□□□ 0.03
TYMSP04818 PBX2P1-201ENST00000493219 1291 ntBASIC15.22■□□□□ 0.03
TYMSP04818 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.22■□□□□ 0.03
TYMSP04818 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TYMSP04818 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TYMSP04818 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.22■□□□□ 0.03
TYMSP04818 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TYMSP04818 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.21■□□□□ 0.03
TYMSP04818 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.21■□□□□ 0.03
TYMSP04818 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.21■□□□□ 0.03
TYMSP04818 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TYMSP04818 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.21■□□□□ 0.03
TYMSP04818 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.21■□□□□ 0.03
TYMSP04818 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.21■□□□□ 0.03
TYMSP04818 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
TYMSP04818 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.21■□□□□ 0.03
TYMSP04818 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TYMSP04818 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
TYMSP04818 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.21■□□□□ 0.03
TYMSP04818 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.21■□□□□ 0.03
TYMSP04818 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TYMSP04818 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TYMSP04818 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TYMSP04818 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TYMSP04818 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TYMSP04818 AC008406.3-201ENST00000620001 1374 ntBASIC15.21■□□□□ 0.02
TYMSP04818 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
TYMSP04818 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.21■□□□□ 0.02
TYMSP04818 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TYMSP04818 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
TYMSP04818 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TYMSP04818 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.2■□□□□ 0.02
TYMSP04818 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TYMSP04818 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 MIR572-201ENST00000384983 95 ntBASIC15.2■□□□□ 0.02
TYMSP04818 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.2■□□□□ 0.02
TYMSP04818 AP001330.3-201ENST00000520123 633 ntBASIC15.2■□□□□ 0.02
TYMSP04818 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.2■□□□□ 0.02
TYMSP04818 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.2■□□□□ 0.02
TYMSP04818 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TYMSP04818 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.2■□□□□ 0.02
TYMSP04818 AC104581.1-202ENST00000635932 2618 ntBASIC15.2■□□□□ 0.02
TYMSP04818 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TYMSP04818 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TYMSP04818 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TYMSP04818 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TYMSP04818 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.19■□□□□ 0.02
TYMSP04818 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.19■□□□□ 0.02
TYMSP04818 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.19■□□□□ 0.02
TYMSP04818 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.19■□□□□ 0.02
TYMSP04818 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TYMSP04818 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.19■□□□□ 0.02
TYMSP04818 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TYMSP04818 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TYMSP04818 FZD10-202ENST00000539839 3282 ntBASIC15.19■□□□□ 0.02
TYMSP04818 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TYMSP04818 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.19■□□□□ 0.02
TYMSP04818 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TYMSP04818 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms