Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 KRT16P2-201ENST00000414673 1423 ntBASIC17.11■□□□□ 0.33
HLA-DQB1P01920 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 AC068880.1-201ENST00000507289 2297 ntBASIC17.1■□□□□ 0.33
HLA-DQB1P01920 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.1■□□□□ 0.33
HLA-DQB1P01920 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 MIR572-201ENST00000384983 95 ntBASIC17.1■□□□□ 0.33
HLA-DQB1P01920 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB1P01920 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.09■□□□□ 0.33
HLA-DQB1P01920 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB1P01920 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DQB1P01920 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 PBX2P1-201ENST00000493219 1291 ntBASIC17.08■□□□□ 0.32
HLA-DQB1P01920 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB1P01920 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.07■□□□□ 0.32
HLA-DQB1P01920 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 EDA-201ENST00000338901 1233 ntBASIC17.07■□□□□ 0.32
HLA-DQB1P01920 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 AC106739.1-201ENST00000617035 715 ntBASIC17.07■□□□□ 0.32
HLA-DQB1P01920 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms