Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE6O95741 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE6O95741 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CPNE6O95741 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 AC023632.3-201ENST00000521633 145 ntBASIC19.44■□□□□ 0.7
CPNE6O95741 PRKY-204ENST00000533551 1019 ntBASIC19.44■□□□□ 0.7
CPNE6O95741 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE6O95741 AP001412.1-201ENST00000608405 714 ntBASIC19.44■□□□□ 0.7
CPNE6O95741 MIR2861-201ENST00000636310 90 ntBASIC19.44■□□□□ 0.7
CPNE6O95741 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE6O95741 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CPNE6O95741 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE6O95741 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE6O95741 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPNE6O95741 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE6O95741 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE6O95741 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE6O95741 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE6O95741 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.43■□□□□ 0.7
CPNE6O95741 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPNE6O95741 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE6O95741 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPNE6O95741 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE6O95741 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE6O95741 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE6O95741 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE6O95741 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.42■□□□□ 0.7
CPNE6O95741 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPNE6O95741 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPNE6O95741 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE6O95741 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.42■□□□□ 0.7
CPNE6O95741 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.42■□□□□ 0.7
CPNE6O95741 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE6O95741 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE6O95741 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE6O95741 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE6O95741 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CPNE6O95741 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CPNE6O95741 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE6O95741 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE6O95741 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 AC073912.3-201ENST00000624414 853 ntBASIC19.41■□□□□ 0.7
CPNE6O95741 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE6O95741 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CPNE6O95741 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.41■□□□□ 0.7
CPNE6O95741 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE6O95741 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE6O95741 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE6O95741 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE6O95741 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CPNE6O95741 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE6O95741 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE6O95741 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE6O95741 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms