Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RAPGEF3O95398 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC29.92■■■□□ 2.38
RAPGEF3O95398 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC29.92■■■□□ 2.38
RAPGEF3O95398 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
RAPGEF3O95398 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
RAPGEF3O95398 H19-201ENST00000411754 1788 ntTSL 5 BASIC29.92■■■□□ 2.38
RAPGEF3O95398 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC29.92■■■□□ 2.38
RAPGEF3O95398 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF3O95398 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF3O95398 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF3O95398 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF3O95398 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC29.91■■■□□ 2.38
RAPGEF3O95398 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
RAPGEF3O95398 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC29.91■■■□□ 2.38
RAPGEF3O95398 ATP5G2P1-201ENST00000433580 426 ntBASIC29.91■■■□□ 2.38
RAPGEF3O95398 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
RAPGEF3O95398 YBX1P10-201ENST00000444752 975 ntBASIC29.91■■■□□ 2.38
RAPGEF3O95398 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.91■■■□□ 2.38
RAPGEF3O95398 AC083849.1-201ENST00000615227 514 ntBASIC29.91■■■□□ 2.38
RAPGEF3O95398 HLA-A-209ENST00000638375 975 ntBASIC29.91■■■□□ 2.38
RAPGEF3O95398 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC29.91■■■□□ 2.38
RAPGEF3O95398 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF3O95398 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF3O95398 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 GXYLT1P6-201ENST00000456472 1187 ntBASIC29.9■■■□□ 2.38
RAPGEF3O95398 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 RN7SL510P-201ENST00000581311 263 ntBASIC29.9■■■□□ 2.38
RAPGEF3O95398 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 AC140113.3-201ENST00000605663 199 ntBASIC29.9■■■□□ 2.38
RAPGEF3O95398 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC29.9■■■□□ 2.38
RAPGEF3O95398 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF3O95398 TFP1-202ENST00000475455 1573 ntBASIC29.9■■■□□ 2.38
RAPGEF3O95398 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RAPGEF3O95398 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RAPGEF3O95398 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RAPGEF3O95398 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RAPGEF3O95398 TUBB8P6-201ENST00000436895 1288 ntBASIC29.89■■■□□ 2.38
RAPGEF3O95398 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC29.89■■■□□ 2.38
RAPGEF3O95398 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC29.89■■■□□ 2.38
RAPGEF3O95398 AL353719.1-201ENST00000566847 864 ntBASIC29.89■■■□□ 2.38
RAPGEF3O95398 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.37
RAPGEF3O95398 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
RAPGEF3O95398 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 KRT8P17-201ENST00000453110 1448 ntBASIC29.88■■■□□ 2.37
RAPGEF3O95398 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF3O95398 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF3O95398 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF3O95398 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 PTPA-216ENST00000432651 857 ntTSL 2 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 SNX5-210ENST00000481323 562 ntTSL 3 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC29.88■■■□□ 2.37
RAPGEF3O95398 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF3O95398 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC29.87■■■□□ 2.37
RAPGEF3O95398 AC116351.2-201ENST00000606540 1585 ntBASIC29.87■■■□□ 2.37
RAPGEF3O95398 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.87■■■□□ 2.37
RAPGEF3O95398 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC29.87■■■□□ 2.37
RAPGEF3O95398 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC29.87■■■□□ 2.37
RAPGEF3O95398 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF3O95398 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF3O95398 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF3O95398 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF3O95398 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC29.86■■■□□ 2.37
RAPGEF3O95398 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF3O95398 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC29.86■■■□□ 2.37
RAPGEF3O95398 TSPY17P-201ENST00000450329 467 ntBASIC29.86■■■□□ 2.37
RAPGEF3O95398 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.86■■■□□ 2.37
RAPGEF3O95398 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC29.86■■■□□ 2.37
RAPGEF3O95398 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC29.86■■■□□ 2.37
RAPGEF3O95398 HYMAI.1-201ENST00000620949 238 ntBASIC29.86■■■□□ 2.37
RAPGEF3O95398 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
RAPGEF3O95398 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF3O95398 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC29.85■■■□□ 2.37
RAPGEF3O95398 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
RAPGEF3O95398 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF3O95398 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF3O95398 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF3O95398 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.85■■■□□ 2.37
RAPGEF3O95398 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms